- Author:
- Dewan Sarwar <sarwarcse@gmail.com>
- Date:
- 2019-01-22 15:53:48+13:00
- Desc:
- adding the removed namepsaces
- Permanent Source URI:
- http://models.cellml.org/workspace/584/rawfile/f42c82f77870f412e1964b9b0701fec331344c8d/model.cellml
<?xml version="1.0" encoding="UTF-8"?>
<model xmlns="http://www.cellml.org/cellml/2.0#" name="model" id="model">
<units name="mmol_per_cm3">
<unit exponent="-3" prefix="centi" units="metre"/>
<unit prefix="milli" units="mole"/>
</units>
<units name="flux">
<unit exponent="-1" units="second"/>
<unit exponent="-3" prefix="centi" units="metre"/>
<unit prefix="milli" units="mole"/>
</units>
<component name="environment">
<variable name="time" units="second" interface="public" id="environment.time"/>
</component>
<component xmlns="" name="modelComp">
<variable name="C_m_Sodium" units="mmol_per_cm3" interface="public" id="modelComp.C_m_Sodium"/>
<variable name="C_c_Sodium" units="mmol_per_cm3" interface="public" id="modelComp.C_c_Sodium"/>
<variable name="C_m_Potassium" units="mmol_per_cm3" interface="public" id="modelComp.C_m_Potassium"/>
<variable name="C_c_Potassium" units="mmol_per_cm3" interface="public" id="modelComp.C_c_Potassium"/>
<variable name="J_Sodium" units="flux" interface="public" id="modelComp.J_Sodium"/>
<variable name="J_Potassium" units="flux" interface="public" id="modelComp.J_Potassium"/>
<variable name="time" units="second" interface="public" id="modelComp.time"/>
<math xmls="http://www.w3.org/1998/Math/MathML"><!--Please fill out this section--></math>
</component>
<connection xmlns=""><!--Please fill out this section--></connection>
<rdf:RDF xmlns:bqmodel="http://biomodels.net/model-qualifiers/"
xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:ro="http://www.obofoundry.org/ro/ro.owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqs="http://www.cellml.org/bqs/1.0#"
xmlns:semsim="http://www.bhi.washington.edu/SemSim#" xmlns:dcterms="http://purl.org/dc/terms/"
xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:opb="http://bhi.washington.edu/OPB#">
<rdf:Description rdf:about="#environment.time" dcterms:description="Time">
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_01023"/>
</rdf:Description>
<rdf:Description xmlns="" rdf:about="#modelComp.J_Potassium">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#Property_5">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#process_1" dcterms:description="">
<semsim:hasMediatorParticipant>
<rdf:Description rdf:about="#mediator_3">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_5"/>
</rdf:Description>
</semsim:hasMediatorParticipant>
<semsim:hasMediatorParticipant>
<rdf:Description rdf:about="#mediator_2">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_3"/>
</rdf:Description>
</semsim:hasMediatorParticipant>
<semsim:hasSinkParticipant>
<rdf:Description rdf:about="#sink_1" semsim:hasMultiplier="1.0">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_9"/>
</rdf:Description>
</semsim:hasSinkParticipant>
<semsim:hasSourceParticipant>
<rdf:Description rdf:about="#source_1" semsim:hasMultiplier="1.0">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_8"/>
</rdf:Description>
</semsim:hasSourceParticipant>
<semsim:name>Potassium flow through Apical plasma membrane</semsim:name>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00593"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Flux of Potassium from Luminal to Cytosol through Apical plasma membrane and
sodium/glucose cotransporter 4
</dcterms:description>
</rdf:Description>
<rdf:Description xmlns="" rdf:about="#modelComp.J_Sodium">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#Property_4">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#process_0" dcterms:description="">
<semsim:hasMediatorParticipant>
<rdf:Description rdf:about="#mediator_1">
<semsim:hasPhysicalEntityReference>
<rdf:Description rdf:about="#entity_5">
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/PR_Q8VDT1"/>
</rdf:Description>
</semsim:hasPhysicalEntityReference>
</rdf:Description>
</semsim:hasMediatorParticipant>
<semsim:hasMediatorParticipant>
<rdf:Description rdf:about="#mediator_0">
<semsim:hasPhysicalEntityReference>
<rdf:Description rdf:about="#entity_3">
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_84666"/>
</rdf:Description>
</semsim:hasPhysicalEntityReference>
</rdf:Description>
</semsim:hasMediatorParticipant>
<semsim:hasSinkParticipant>
<rdf:Description rdf:about="#sink_0" semsim:hasMultiplier="1.0">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_7"/>
</rdf:Description>
</semsim:hasSinkParticipant>
<semsim:hasSourceParticipant>
<rdf:Description rdf:about="#source_0" semsim:hasMultiplier="1.0">
<semsim:hasPhysicalEntityReference rdf:resource="#entity_6"/>
</rdf:Description>
</semsim:hasSourceParticipant>
<semsim:name>Sodium flow through Apical plasma membrane</semsim:name>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00593"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Flux of Sodium from Luminal to Cytosol through Apical plasma membrane and
sodium/glucose cotransporter 4
</dcterms:description>
</rdf:Description>
<rdf:Description xmlns="" rdf:about="#model">
<ro:modelOf rdf:resource="http://purl.obolibrary.org/obo/PR_Q8VDT1"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_74550"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
<ro:compartmentOf rdf:resource="http://purl.obolibrary.org/obo/FMA_9673"/>
</rdf:Description>
<rdf:Description xmlns="" rdf:about="#modelComp.C_c_Potassium">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_3">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#entity_9">
<ro:part_of>
<rdf:Description rdf:about="#entity_1">
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/CHEBI_29103"/>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Concentration of Potassium in the Cytosol compartment</dcterms:description>
</rdf:Description>
<rdf:Description xmlns="" rdf:about="#modelComp.C_m_Potassium">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_2">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#entity_8">
<ro:part_of>
<rdf:Description rdf:about="#entity_0">
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_74550"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/CHEBI_29103"/>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Concentration of Potassium in the Luminal compartment</dcterms:description>
</rdf:Description>
<rdf:Description xmlns="" rdf:about="#modelComp.C_c_Sodium">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_1">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#entity_7">
<ro:part_of>
<rdf:Description rdf:about="#entity_1">
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_66836"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/CHEBI_29101"/>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Concentration of Sodium in the Cytosol compartment</dcterms:description>
</rdf:Description>
<rdf:Description xmlns="" rdf:about="#modelComp.C_m_Sodium">
<semsim:isComputationalComponentFor>
<rdf:Description rdf:about="#property_0">
<semsim:physicalPropertyOf>
<rdf:Description rdf:about="#entity_6">
<ro:part_of>
<rdf:Description rdf:about="#entity_0">
<semsim:hasPhysicalDefinition
rdf:resource="http://purl.obolibrary.org/obo/FMA_74550"/>
</rdf:Description>
</ro:part_of>
<semsim:hasPhysicalDefinition rdf:resource="http://purl.obolibrary.org/obo/CHEBI_29101"/>
</rdf:Description>
</semsim:physicalPropertyOf>
<semsim:hasPhysicalDefinition rdf:resource="http://identifiers.org/opb/OPB_00340"/>
</rdf:Description>
</semsim:isComputationalComponentFor>
<dcterms:description>Concentration of Sodium in the Luminal compartment</dcterms:description>
</rdf:Description>
</rdf:RDF>
</model>
