Location: Standard Virtual Parts Template Models v200906 @ 43bad7646a9d / Template_Promoter_Inductive.cellml

Author:

Mike Cooling <m.cooling@auckland.ac.nz>

Date:

2010-05-25 15:28:56+12:00

Desc:

Added PMR2 keyword metadata, and html information for an exposure.

Permanent Source URI:

http://models.cellml.org/workspace/SVP_Templates200906/rawfile/43bad7646a9d6b9d9d23014b63cc147c5e481b0f/Template_Promoter_Inductive.cellml

<?xml version="1.1" encoding="utf-8"?>

<model name="Template_Promoter_Inductive" cmeta:id="Template_Promoter_Inductive"
    xmlns="http://www.cellml.org/cellml/1.1#"
    xmlns:cellml="http://www.cellml.org/cellml/1.1#"
    xmlns:cmeta="http://www.cellml.org/metadata/1.0#"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
    xmlns:dc="http://purl.org/dc/elements/1.0/"
    xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#"
    >
        
    <rdf:RDF>
            <rdf:Description rdf:about="#Template_Promoter_Inductive">
            <dc:creator>
            <vCard:N rdf:parseType="Resource">
                <vCard:Family>Cooling</vCard:Family>
                <vCard:Given>Mike</vCard:Given>
            </vCard:N>
            <vCard:EMAIL rdf:parseType="Resource">
                <rdf:value>m.cooling@auckland.ac.nz</rdf:value>
                <rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
            </vCard:EMAIL>
            <vCard:ORG rdf:parseType="Resource">
                <vCard:Orgname>Auckland Bioengineering Institute</vCard:Orgname>
                <vCard:Orgunit>University of Auckland</vCard:Orgunit>
            </vCard:ORG>
            </dc:creator>
            </rdf:Description>
   </rdf:RDF>
    
   <units name="per_s">
         <unit units="second" exponent="-1"/>
   </units>
   <units name="femtoliter">
      <unit units="liter" prefix="femto"/>
   </units>
   <units name="perfemto">
      <unit units="dimensionless" prefix="femto" exponent="-1"/>
   </units>
   <units name="M">
      <unit units="mole"/>
      <unit units="liter" exponent="-1"/>
   </units>
   <units name="nM">
      <unit units="M" prefix="nano"/>
   </units>
   <units name="nanos">
      <unit units="dimensionless" prefix="nano"/>
   </units>
   <units name="nM_per_s">
      <unit units="nM"/>
      <unit units="per_s"/>
   </units>
   <units name="per_mole">
      <unit units="mole" exponent="-1"/>
   </units>
   <units name="PoPs">
      <unit units="second" exponent="-1"/>
   </units>
  
   <component name="Template_Promoter_Inductive">
       <variable name="JRNA" units="nM_per_s" public_interface="out"/>
            <variable name="localVolume" units="femtoliter" public_interface="in"/>
            <variable name="avogadrosConstant" units="per_mole" initial_value="6.0221415e23"/>
            <variable name="k" units="PoPs" public_interface="in"/>
            <variable name="tFactor" units="nM" public_interface="in"/>
            <variable name="n" units="dimensionless" public_interface="in"/>
            <variable name="Km" units="nM" public_interface="in"/>
            <math xmlns="http://www.w3.org/1998/Math/MathML">
               <apply>
                  <eq/>
                  <ci>JRNA</ci>
                  <apply>
                     <divide/>
                     <apply>
                        <times/>
                        <apply>
                           <divide/>
                           <apply>
                              <times/>
                              <ci>k</ci>
                              <apply>
                              	<power/>
                                  <ci>tFactor</ci>
                                  <ci>n</ci>
                              </apply>
                           </apply>
                           <apply>
                              <plus/>
                              <apply>
                              	<power/>
                                   <ci>Km</ci>
                                   <ci>n</ci>
                              </apply>
                              <apply>
                                <power/>
                                   <ci>tFactor</ci>
                                   <ci>n</ci>
                              </apply>
                           </apply>
                        </apply>
                        <cn cellml:units="nanos">1e9</cn>
                     </apply>
                     <apply>
                        <times/>
                        <ci>localVolume</ci>
                        <cn cellml:units="perfemto">1e-15</cn>
                        <ci>avogadrosConstant</ci>
                     </apply>
                  </apply>
               </apply>
      	   </math>
   </component>
</model>