Location: Houart, Dupont and Goldbeter 1999 @ 83b81f34a0da / constitutive_law1.cellml

Author:
rcai987 <devnull@localhost>
Date:
2015-02-02 13:12:59+13:00
Desc:
Added annotations to houart_dupont_goldbeter_1999.cellml model
Permanent Source URI:
http://models.cellml.org/workspace/houart_dupont_goldbeter_1999/rawfile/83b81f34a0da578f2c24f2e26ba25e1bb6e2d13c/constitutive_law1.cellml

<?xml version="1.0"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" xmlns:cmeta="http://www.cellml.org/metadata/1.1#" cmeta:id="constitutive_law1" name="constitutive_law1">
	<!-- documentation -->
	<documentation xmlns="http://cellml.org/tmp-documentation">
		<article>
			<articleinfo>
				<title>Bursting, Chaos and Birhythmicity Originating from Self-modulation of the Inositol 1,4,5-triphosphate Signal in a Model for Intracellular Ca2+ Oscillations</title>
				<author>
					<firstname>Mona</firstname>
					<surname>Zhu</surname>
					<affiliation>
						<shortaffil>Auckland Bioengineering Institute, University of Auckland</shortaffil>
					</affiliation>
				</author>
			</articleinfo>
			<section id="sec_status">
				<title>Model Status</title>
				<para>This is an import for the model "houart_1999_1.1". It is used to define a reoccuring structure within the model and may be used for multiple equations in the model. This file is known to run only in OpenCell in conjunction with the base file.</para>
			</section>
			<sect1 id="sec_structure">
				<title>Model Structure</title>
				<para>
					Bursting, Chaos and Birhythmicity Originating from Self-modulation of the Inositol 1,4,5-triphosphate Signal in a Model for Intracellular Ca2+ Oscillations, Houart G, Dupont G, Goldbeter A, 1999, <emphasis>Bulletin of Mathematical Biology</emphasis>
					, 61, 507-530 <ulink url="http://www.ncbi.nlm.nih.gov/pubmed/17883229">PubMed ID: 17883229</ulink>
				</para>
			</sect1>
		</article>
	</documentation>  
	
	<!-- units -->
	<units name="minute">
      <unit multiplier="60" units="second"/>
   </units>
   <units name="per_minute">
      <unit exponent="-1" units="minute"/>
   </units>
   <units name="per_litre">
      <unit exponent="-1" units="litre"/>
   </units>
   <units name="micromolar">
      <unit prefix="micro" units="mole"/>
      <unit units="per_litre"/>
   </units>
   <units name="micromolar_per_minute">
      <unit units="micromolar"/>
      <unit units="per_minute"/>
   </units>
   
   <!-- components -->
   <component name="interface">
      <variable name="A" public_interface="out" units="micromolar_per_minute"/>
      <variable name="B" public_interface="in" units="micromolar_per_minute"/>
      <variable name="C" public_interface="in" units="micromolar"/>
      <variable name="D" public_interface="in" units="micromolar"/>
      <variable name="E" public_interface="in" units="micromolar"/>
      <variable name="F" public_interface="in" units="micromolar"/>
      <variable name="G" public_interface="in" units="micromolar"/>
      <variable name="H" public_interface="in" units="micromolar"/>
      <variable name="I" public_interface="in" units="dimensionless"/>
      <variable name="J" public_interface="in" units="dimensionless"/>
      <variable name="K" public_interface="in" units="dimensionless"/>
      <math xmlns="http://www.w3.org/1998/Math/MathML">
         <apply>
            <eq/>
            <ci>A</ci>
            <apply>
               <divide/>
               <apply>
                  <times/>
                  <apply>
                     <divide/>
                     <apply>
                        <times/>
                        <apply>
                           <divide/>
                           <apply>
                              <times/>
                              <ci>B</ci>
                              <apply>
                                 <power/>
                                 <ci>C</ci>
                                 <ci>I</ci>
                              </apply>
                           </apply>
                           <apply>
                              <plus/>
                              <apply>
                                 <power/>
                                 <ci>F</ci>
                                 <ci>I</ci>
                              </apply>
                              <apply>
                                 <power/>
                                 <ci>C</ci>
                                 <ci>I</ci>
                              </apply>
                           </apply>
                        </apply>
                        <apply>
                           <power/>
                           <ci>D</ci>
                           <ci>J</ci>
                        </apply>
                     </apply>
                     <apply>
                        <plus/>
                        <apply>
                           <power/>
                           <ci>G</ci>
                           <ci>J</ci>
                        </apply>
                        <apply>
                           <power/>
                           <ci>D</ci>
                           <ci>J</ci>
                        </apply>
                     </apply>
                  </apply>
                  <apply>
                     <power/>
                     <ci>E</ci>
                     <ci>K</ci>
                  </apply>
               </apply>
               <apply>
                  <plus/>
                  <apply>
                     <power/>
                     <ci>H</ci>
                     <ci>K</ci>
                  </apply>
                  <apply>
                     <power/>
                     <ci>E</ci>
                     <ci>K</ci>
                  </apply>
               </apply>
            </apply>
         </apply>
      </math>
   </component>
	
	<!-- metadata -->
	<rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
		<rdf:Description rdf:about="constitutive_law1">
			<dc:creator xmlns:dc="http://purl.org/dc/elements/1.1/" rdf:parseType="Resource">
				<vCard:N xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
					<vCard:Family>Zhu</vCard:Family>
					<vCard:Given>Xin Yue</vCard:Given>
					<vCard:Other>Mona</vCard:Other>
				</vCard:N>
				<vCard:EMAIL xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
					<rdf:value>xzhu055@aucklanduni.ac.nz</rdf:value>
					<rdf:type rdf:resource="http://imc.org/vCard/3.0#internet"/>
				</vCard:EMAIL>
				<vCard:ORG xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" rdf:parseType="Resource">
					<vCard:Orgname>The University of Auckland</vCard:Orgname>
					<vCard:Orgunit>Auckland Bioengineering Institute</vCard:Orgunit>
				</vCard:ORG>
			</dc:creator>
			<dcterms:created xmlns:dcterms="http://purl.org/dc/terms/" rdf:parseType="Resource">
				<dcterms:W3CDTF>14-12-2010</dcterms:W3CDTF>
			</dcterms:created>
		</rdf:Description>
	</rdf:RDF> 
</model>