- Author:
- Pulasthi <devnull@localhost>
- Date:
- 2009-10-30 11:57:20+13:00
- Desc:
- Uploading of schematic diagrams
- Permanent Source URI:
- http://models.cellml.org/workspace/marcano_yang_nievesgonzalez_clausen_moore_2009/rawfile/194760a37a563d8b644012ce7c68bbf2dd859f81/Figure2C-decomposition/kinetic_equations_model.xml
<?xml version="1.0"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" name="kinetic_equations_model">
<component name="kinetic_equations">
<variable name="time" private_interface="out" public_interface="in" units="second"/>
<variable initial_value="E_0_initial" name="E_0" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_0_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_1_initial" name="E_1" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_1_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_2_initial" name="E_2" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_2_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_3_initial" name="E_3" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_3_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_4_initial" name="E_4" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_4_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_5_initial" name="E_5" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_5_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_6_initial" name="E_6" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_6_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_7_initial" name="E_7" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_7_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_8_initial" name="E_8" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_8_initial" public_interface="in" units="dimensionless"/>
<variable initial_value="E_9_temp_initial" name="E_9_temp" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_9_temp_initial" public_interface="in" units="dimensionless"/>
<variable name="E_9" private_interface="out" public_interface="out" units="dimensionless"/>
<variable name="E_T" private_interface="out" public_interface="in" units="dimensionless"/>
<variable name="k_on" private_interface="out" public_interface="in" units="per_mM_per_second"/>
<variable name="k_1" private_interface="out" public_interface="in" units="per_second"/>
<variable name="k_2" private_interface="out" public_interface="in" units="per_second"/>
<variable name="k_3o" private_interface="out" public_interface="in" units="per_second"/>
<variable name="k_3i" private_interface="out" public_interface="in" units="per_second"/>
<variable name="k_4" private_interface="out" public_interface="in" units="per_second"/>
<variable name="k_fe" private_interface="out" public_interface="in" units="per_second"/>
<variable name="k_be" private_interface="out" public_interface="in" units="per_second"/>
<variable name="k_ff" private_interface="out" public_interface="in" units="per_second"/>
<variable name="k_bf" private_interface="out" public_interface="in" units="per_second"/>
<variable name="Ce_Na" private_interface="out" public_interface="in" units="mM"/>
<variable name="Ce_K" private_interface="out" public_interface="in" units="mM"/>
<variable name="Ce_Cl" private_interface="out" public_interface="in" units="mM"/>
<variable name="Ci_Na" private_interface="out" public_interface="in" units="mM"/>
<variable name="Ci_K" private_interface="out" public_interface="in" units="mM"/>
<variable name="Ci_Cl" private_interface="out" public_interface="in" units="mM"/>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_0</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<ci>k_on</ci>
</apply>
<ci>Ce_Na</ci>
<ci>E_0</ci>
</apply>
<apply>
<times/>
<ci>k_1</ci>
<ci>E_1</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_be</ci>
<ci>E_0</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_fe</ci>
<ci>E_9</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_1</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<ci>k_on</ci>
</apply>
<ci>Ce_Cl</ci>
<ci>E_1</ci>
</apply>
<apply>
<times/>
<ci>k_2</ci>
<ci>E_2</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_1</ci>
<ci>E_1</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_on</ci>
<ci>Ce_Na</ci>
<ci>E_0</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_2</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<ci>k_on</ci>
</apply>
<ci>Ce_K</ci>
<ci>E_2</ci>
</apply>
<apply>
<times/>
<ci>k_3o</ci>
<ci>E_3</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_2</ci>
<ci>E_2</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_on</ci>
<ci>Ce_Cl</ci>
<ci>E_1</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_3</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<ci>k_on</ci>
</apply>
<ci>Ce_Cl</ci>
<ci>E_3</ci>
</apply>
<apply>
<times/>
<ci>k_4</ci>
<ci>E_4</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_3o</ci>
<ci>E_3</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_on</ci>
<ci>Ce_K</ci>
<ci>E_2</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_4</ci>
</apply>
<apply>
<minus/>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<times/>
<ci>k_on</ci>
<ci>Ce_Cl</ci>
<ci>E_3</ci>
</apply>
<apply>
<times/>
<ci>k_4</ci>
<ci>E_4</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_bf</ci>
<ci>E_5</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_ff</ci>
<ci>E_4</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_5</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<minus/>
<apply>
<times/>
<ci>k_on</ci>
<ci>Ci_Na</ci>
<ci>E_6</ci>
</apply>
<apply>
<times/>
<ci>k_1</ci>
<ci>E_5</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_bf</ci>
<ci>E_5</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_ff</ci>
<ci>E_4</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_6</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<times/>
<apply>
<minus/>
<ci>k_on</ci>
</apply>
<ci>Ci_Na</ci>
<ci>E_6</ci>
</apply>
<apply>
<times/>
<ci>k_2</ci>
<ci>E_6</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_1</ci>
<ci>E_5</ci>
</apply>
<apply>
<times/>
<ci>k_on</ci>
<ci>Ci_Cl</ci>
<ci>E_7</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_7</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<ci>k_on</ci>
</apply>
<ci>Ci_Cl</ci>
<ci>E_7</ci>
</apply>
<apply>
<times/>
<ci>k_2</ci>
<ci>E_6</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_3i</ci>
<ci>E_7</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_on</ci>
<ci>Ci_K</ci>
<ci>E_8</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_8</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<ci>k_on</ci>
</apply>
<ci>Ci_K</ci>
<ci>E_8</ci>
</apply>
<apply>
<times/>
<ci>k_3i</ci>
<ci>E_7</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_4</ci>
<ci>E_8</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_on</ci>
<ci>Ci_Cl</ci>
<ci>E_9</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<apply>
<diff/>
<bvar>
<ci>time</ci>
</bvar>
<ci>E_9_temp</ci>
</apply>
<apply>
<plus/>
<apply>
<minus/>
<apply>
<plus/>
<apply>
<times/>
<apply>
<minus/>
<ci>k_on</ci>
</apply>
<ci>Ci_Cl</ci>
<ci>E_9</ci>
</apply>
<apply>
<times/>
<ci>k_4</ci>
<ci>E_8</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_fe</ci>
<ci>E_9</ci>
</apply>
</apply>
<apply>
<times/>
<ci>k_be</ci>
<ci>E_0</ci>
</apply>
</apply>
</apply>
<apply>
<eq/>
<ci>E_9</ci>
<apply>
<minus/>
<ci>E_T</ci>
<apply>
<plus/>
<ci>E_0</ci>
<ci>E_1</ci>
<ci>E_2</ci>
<ci>E_3</ci>
<ci>E_4</ci>
<ci>E_5</ci>
<ci>E_6</ci>
<ci>E_7</ci>
<ci>E_8</ci>
</apply>
</apply>
</apply>
</math>
</component>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="Marcano_et_al_2009_units_model.xml">
<units name="per_second" units_ref="per_second"/>
<units name="mM" units_ref="mM"/>
<units name="per_mM_per_second" units_ref="per_mM_per_second"/>
<units name="mM_per_second" units_ref="mM_per_second"/>
</import>
</model>
