- Author:
- David Nickerson <nickerso@users.sourceforge.net>
- Date:
- 2009-08-25 00:00:34+12:00
- Desc:
- adding the graphing metadata description of Figure 2A and an example plot image generated using the metadata with CellMLSimulator
- Permanent Source URI:
- http://models.cellml.org/workspace/marcano_yang_nievesgonzalez_clausen_moore_2009/rawfile/f1c487ad2865abd45f4afd5b4f1dba8fe67df621/Figure2A-decomposition/isoformA.xml
<?xml version="1.0"?>
<model xmlns="http://www.cellml.org/cellml/1.1#" name="Marcano_et_al_2009_variable_values_model">
<component name="parameters">
<variable initial_value="100000" name="k_on" private_interface="out" public_interface="out" units="per_mM_per_second"/>
<variable initial_value="100000" name="k_1" private_interface="out" public_interface="out" units="per_second"/>
<variable initial_value="134625740.4" name="k_2" private_interface="out" public_interface="out" units="per_second"/>
<variable initial_value="112070" name="k_3o" private_interface="out" public_interface="out" units="per_second"/>
<variable initial_value="217960" name="k_3i" private_interface="out" public_interface="out" units="per_second"/>
<variable initial_value="2140869.2" name="k_4" private_interface="out" public_interface="out" units="per_second"/>
<variable initial_value="18781" name="k_fe" private_interface="out" public_interface="out" units="per_second"/>
<variable initial_value="1824" name="k_ff" private_interface="out" public_interface="out" units="per_second"/>
<variable initial_value="2724" name="k_bf" private_interface="out" public_interface="out" units="per_second"/>
<variable initial_value="1" name="E_T" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="10" name="Ce_K" private_interface="out" public_interface="out" units="mM"/>
<variable initial_value="110" name="Ce_Cl" private_interface="out" public_interface="out" units="mM"/>
<variable initial_value="7" name="Ci_Na" private_interface="out" public_interface="out" units="mM"/>
<variable initial_value="124" name="Ci_K" private_interface="out" public_interface="out" units="mM"/>
<variable initial_value="9" name="Ci_Cl" private_interface="out" public_interface="out" units="mM"/>
</component>
<component name="initial_values">
<variable initial_value="0" name="Ce_Na_initial" private_interface="out" public_interface="out" units="mM"/>
<variable initial_value="0.3156" name="E_0_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.00093" name="E_1_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="7.66944e-5" name="E_2_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0015143" name="E_3_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0078243" name="E_4_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0393869" name="E_5_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.00575958" name="E_6_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.86165" name="E_7_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.015153" name="E_8_initial" private_interface="out" public_interface="out" units="dimensionless"/>
<variable initial_value="0.0361485" name="E_9_temp_initial" private_interface="out" public_interface="out" units="dimensionless"/>
</component>
<import xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="Marcano_et_al_2009_units_model.xml">
<units name="per_second" units_ref="per_second"/>
<units name="mM" units_ref="mM"/>
<units name="per_mM_per_second" units_ref="per_mM_per_second"/>
<units name="mM_per_second" units_ref="mM_per_second"/>
</import>
</model>
