Location: Metabolic Component Library @ b9be078f1e21 / CellML-source / CellMLTools / template / components.vm

Author:
Matthias K?nig <matthias.koenig@charite.de>
Date:
2013-04-18 21:52:42+02:00
Desc:
Wolf Heinrich Example implemented and working !
Permanent Source URI:
https://models.cellml.org/w/matthiaskoenig/MetabolicComponentLibrary/rawfile/b9be078f1e2152d7c1b817af12a7ddcb8db3c0df/CellML-source/CellMLTools/template/components.vm

Metabolic Component Library for CellML

Matthias Koenig [1] & Randall Britten [2]
[1] Charite Berlin, matthias.koenig@charite.de
[2] Auckland Bioengineering Institute

Implementation of standardized reaction kinetics in CellML for reuse in metabolic models. The library covers the metabolic function definitions for processes from COPASI 4.8 (Bulid 35).

Components

Substrate(s) : S (S1, S2, ...)
Product(s) : P (P1, P2, ... )
Inhibitor(s) : I (I1, I2, ...)
Activator(s) : A (A1, A2, ...)
Modifier(s) : M (M1, M2, ...)

#* Render the HTML overview dynamically based on the defined components. Changes in the underlying definitions of the components will be directly reflected in the documentation. *# #foreach( $c in $cSet )

$c.getName()

(Validation Errors: ${c.getNValidationErrors()})

#foreach ( $var in $c.getVariablesFromKineticsComponent() ) $var
#end
          $c.getName()
Mechanisms
#foreach( $m in $c.getSBGNSet()) $m
#end
#foreach( $m in $c.getSBGNSet()) ${m}    #end

#end