Generated Code

The following is c_ida code generated by the CellML API from this CellML file. (Back to language selection)

The raw code is available.

/*
   There are a total of 0 entries in the algebraic variable array.
   There are a total of 11 entries in each of the rate and state variable arrays.
   There are a total of 18 entries in the constant variable array.
 */
/*
 * VOI is time in component environment (second).
 * CONSTANTS[0] is k11 in component kinetic_constants (second_order_rate_constant).
 * CONSTANTS[1] is k11_ in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[2] is k71 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[3] is k72 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[4] is k12 in component kinetic_constants (second_order_rate_constant).
 * CONSTANTS[5] is k12_ in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[6] is k51 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[7] is k52 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[8] is k41 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[9] is k31 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[10] is k32 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[11] is k42 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[12] is k22 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[13] is k22_ in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[14] is k21 in component kinetic_constants (first_order_rate_constant).
 * CONSTANTS[15] is k21_ in component kinetic_constants (first_order_rate_constant).
 * STATES[0] is PB in component PB (micromolar).
 * CONSTANTS[16] is kreset1 in component kreset1 (first_order_rate_constant).
 * STATES[1] is A1 in component A1 (micromolar).
 * STATES[2] is A2 in component A2 (micromolar).
 * STATES[3] is PC1 in component PC1 (micromolar).
 * STATES[4] is PF1 in component PF1 (micromolar).
 * STATES[5] is PG1 in component PG1 (micromolar).
 * STATES[6] is PC2 in component PC2 (micromolar).
 * STATES[7] is PF2 in component PF2 (micromolar).
 * STATES[8] is PD1 in component PD1 (micromolar).
 * STATES[9] is PE1 in component PE1 (micromolar).
 * STATES[10] is PD2 in component PD2 (micromolar).
 * CONSTANTS[17] is PE2 in component PE2 (micromolar).
 * RATES[0] is d/dt PB in component PB (micromolar).
 * RATES[1] is d/dt A1 in component A1 (micromolar).
 * RATES[2] is d/dt A2 in component A2 (micromolar).
 * RATES[3] is d/dt PC1 in component PC1 (micromolar).
 * RATES[8] is d/dt PD1 in component PD1 (micromolar).
 * RATES[9] is d/dt PE1 in component PE1 (micromolar).
 * RATES[4] is d/dt PF1 in component PF1 (micromolar).
 * RATES[5] is d/dt PG1 in component PG1 (micromolar).
 * RATES[6] is d/dt PC2 in component PC2 (micromolar).
 * RATES[10] is d/dt PD2 in component PD2 (micromolar).
 * RATES[7] is d/dt PF2 in component PF2 (micromolar).
 * There are a total of 0 condition variables.
 */
void
initConsts(double* CONSTANTS, double* RATES, double *STATES)
{
CONSTANTS[0] = 110.0;
CONSTANTS[1] = 25.0;
CONSTANTS[2] = 0.1;
CONSTANTS[3] = 60.0;
CONSTANTS[4] = 110.0;
CONSTANTS[5] = 0.2;
CONSTANTS[6] = 7.0;
CONSTANTS[7] = 0.0;
CONSTANTS[8] = 60.0;
CONSTANTS[9] = 500.0;
CONSTANTS[10] = 50.0;
CONSTANTS[11] = 70.0;
CONSTANTS[12] = 100.0;
CONSTANTS[13] = 17.0;
CONSTANTS[14] = 100.0;
CONSTANTS[15] = 0.2;
STATES[0] = 0.1;
CONSTANTS[16] = 35.0;
STATES[1] = 0.1;
STATES[2] = 0.1;
STATES[3] = 0.1;
STATES[4] = 0.1;
STATES[5] = 0.1;
STATES[6] = 0.1;
STATES[7] = 0.1;
STATES[8] = 0.1;
STATES[9] = 0.1;
STATES[10] = 0.1;
CONSTANTS[17] = 0.1;
RATES[0] = 0.1001;
RATES[1] = 0.1001;
RATES[2] = 0.1001;
RATES[3] = 0.1001;
RATES[8] = 0.1001;
RATES[9] = 0.1001;
RATES[4] = 0.1001;
RATES[5] = 0.1001;
RATES[6] = 0.1001;
RATES[10] = 0.1001;
RATES[7] = 0.1001;
}
void
computeResiduals(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
                 double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
resid[0] = RATES[0] - ( CONSTANTS[1]*STATES[3]+ CONSTANTS[2]*STATES[4]+ CONSTANTS[16]*STATES[5]+ CONSTANTS[5]*STATES[6]+ CONSTANTS[3]*STATES[7]) - ( CONSTANTS[0]*STATES[1]*STATES[0]+ CONSTANTS[4]*STATES[2]*STATES[0]);
resid[1] = RATES[1] -  CONSTANTS[1]*STATES[3] -  CONSTANTS[0]*STATES[1]*STATES[0];
resid[2] = RATES[2] -  CONSTANTS[5]*STATES[6] -  CONSTANTS[4]*STATES[2]*STATES[0];
resid[3] = RATES[3] - ( CONSTANTS[0]*STATES[1]*STATES[0] -  (CONSTANTS[1]+CONSTANTS[14])*STATES[3])+ CONSTANTS[15]*STATES[8];
resid[4] = RATES[8] -  CONSTANTS[14]*STATES[3] -  (CONSTANTS[15]+CONSTANTS[9])*STATES[8];
resid[5] = RATES[9] -  CONSTANTS[9]*STATES[8] -  CONSTANTS[8]*STATES[9];
resid[6] = RATES[4] -  CONSTANTS[8]*STATES[9] -  (CONSTANTS[6]+CONSTANTS[2])*STATES[4];
resid[7] = RATES[5] -  CONSTANTS[6]*STATES[4] -  CONSTANTS[16]*STATES[5];
resid[8] = RATES[6] - ( CONSTANTS[4]*STATES[2]*STATES[0] -  (CONSTANTS[5]+CONSTANTS[12])*STATES[6])+ CONSTANTS[13]*STATES[10];
resid[9] = RATES[10] -  CONSTANTS[12]*STATES[6] -  (CONSTANTS[13]+CONSTANTS[10])*STATES[10];
resid[10] = RATES[7] -  CONSTANTS[11]*CONSTANTS[17] -  (CONSTANTS[7]+CONSTANTS[3])*STATES[7];
}
void
computeVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
computeEssentialVariables(double VOI, double* CONSTANTS, double* RATES, double* STATES, double* ALGEBRAIC)
{
}
void
getStateInformation(double* SI)
{
SI[0] = 1.0;
SI[1] = 1.0;
SI[2] = 1.0;
SI[3] = 1.0;
SI[4] = 1.0;
SI[5] = 1.0;
SI[6] = 1.0;
SI[7] = 1.0;
SI[8] = 1.0;
SI[9] = 1.0;
SI[10] = 1.0;
}
void
computeRoots(double VOI, double* CONSTANTS, double* RATES, double* OLDRATES, double* STATES,
             double* OLDSTATES, double* ALGEBRAIC, double* CONDVARS)
{
}