Exposures
Below is a listing of model exposures (100 per page | full list)
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A Quantitative Model of Human Jejunal Smooth Muscle Cell Electrophysiology
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An analysis of deformation-dependent electromechanical coupling in the mouse heart
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Davies ISAP 2012
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Ionic mechanisms for electrical heterogeneity between rabbit Purkinje fiber and ventricular cells
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Simulations of the effects of inositol 1,4,5-trisphosphate 3-kinase and 5-phosphatase activities on Ca2+ oscillations
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[Ca2+]i oscillations in sympathetic neurons: an experimental test of a theoretical model
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A human ventricular cell model for investigation of cardiac arrhythmias under hyperkalaemic conditions
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A model for pacemaking in substantia nigra neurons (A simple model based on a spherical geometry)
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A Primer on Modular Mass Action Modelling with CellML
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A single compartment model of pacemaking in dissasociated Substantia nigra neurons with hyperbolic tetrahedral geometry
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A Tutorial on Creating a Systems Model from SVPs
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Activation of the Liver Glycogen Phosphorylase by Ca2+ Oscillations: a Theoretical Study
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Adrian, Chandler, Hodgkin, 1970
- Voltage clamp experiments in striated muscle fibres
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Aguda, 1999
- A quantitative analysis of the kinetics of the G2 DNA damage checkpoint system
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Aguda, Tang, 1999
- The kinetic origins of the restriction point in the mammalian cell cycle
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Albrecht, Colegrove, Friel, 2002
- Differential Regulation of ER Ca2+ Uptake and Release Rates Accounts for Multiple Modes of Ca2+-induced Ca2+ Release
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Albrecht, Colegrove, Hongpaisan, Pivovarova, Andrews, Friel, 2001
- Multiple Modes of Calcium-induced Calcium Release in Sympathetic Neurons I: Attenuation of Endoplasmic Reticulum Ca2+ Accumulation at Low [Ca2+]i during Weak Depolarisation
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Alexander, Wahl, 2010
- Self-tolerance and Autoimmunity in a Regulatory T Cell Model
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An integrated model of eicosanoid metabolism and signaling based on lipidomics flux analysis
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An updated computational model of rabbit sinoatrial action potential to investigate the mechanisms of heart rate modulation.
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Andre playing with nested tasks in SED-ML
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Andre's Hodgkin & Huxley with CellML
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Andre's Hodgkin & Huxley with CellML
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Aon, Cortassa, 2002
- Coherent and robust modulation of a metabolic network by cytoskeletal organization and dynamics
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Arresting the mitotic oscillator and the control of cell proliferation: insights from a cascade model for cdc2 kinase activation
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Arresting the mitotic oscillator and the control of cell proliferation: insights from a cascade model for cdc2 kinase activation
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Aslanidi, Boyett, Dobrzynski, Li, Zhang, 2009
- Mechanisms of transition from normal to reentrant electrical activity in a model of rabbit atrial tissue: interaction of tissue heterogeneity and anisotropy
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Aslanidi, Stewart, Boyett, Zhang, 2009
- Optimal velocity and safety of discontinuous conduction through the heterogeneous Purkinje-ventricular junction
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Asthagiri, Lauffenburger, 2001
- A Compuational Study of Feedback Effects on Signal Dynamics in a Mitogen-Activated Protein Kinase (MAPK) Pathway Model
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Bagci, Vodovotz, Billiar, Ermentrout, Bahar, 2006
- Bistability in apoptosis: roles of bax, bcl-2, and mitochondrial permeability transition pores
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Bagci, Vodovotz, Billiar, Ermentrout, Bahar, 2008
- Computational insights on the competing effects of nitric oxide in regulating apoptosis
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Bakker, Mensonides, Teusink, van Hoek, Michels, Westerhoff, 2000
- Compartmentation protects trypanosomes from the dangerous design of glycolysis
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Bakker, Michels, Opperdoes, Westerhoff, 1997
- Glycolysis in Bloodstream Form Trypanosoma brucei Can Be Understood in Terms of the Kinetics of the Glycolytic Enzymes
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Barberis, Klipp, Vanoni, Alberghina, 2007
- Cell Size at S Phase Initiation: An Emergent Property of the G1/S Network
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Baylor, Hollingworth, Chandler, 2002
- Comparison of Simulated and Measured Calcium Sparks in Intact Skeletal Muscle Fibers of the Frog
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Beard, 2005
- A biophysical model of the mitochondrial respiratory system and oxidative phosphorylation
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Ben-Tal, 2006
- Simplified models for gas exchange in the human lungs
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Benson, Aslanidi, Zhang, Holden, 2008
- The canine virtual ventricular wall: a platform for dissecting pharmacological effects on propagation and arrhythmogenesis
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Bernus, Wilders, Zemlin, Verschelde, Panfilov, 2002
- A computationally efficient electrophysiological model of human ventricular cells
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Bertram, Arnot, Zamponi, 2002
- Role for G protein G-beta-gamma isoform specificity in synaptic signal processing: a computational study
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Bertram, Pedersen, Luciani, Sherman, 2006
- A simplified model for mitochondrial ATP production
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Bertram, Previte, Sherman, Kinard, Satin, 2000
- The Phantom Burster Model for Pancreatic Beta Cells
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Bertram, Rhoads, Cimbora, 2008
- A phantom bursting mechanism for episodic bursting
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Bertram, Satin, Pedersen, Luciani, Sherman, 2007
- Intra- and inter-islet synchronization of metabolically driven insulin secretion
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Bertram, Satin, Zhang, Smolen, Sherman, 2004
- Calcium and Glycolysis Mediate Multiple Bursting Modes in Pancreatic Islets
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Bertram, Sherman, 2004
- A Calcium-based Phantom Bursting Model for Pancreatic Islets
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Bertram, Smolen, Sherman, Mears, Atwater, Martin, Soria, 1995
- A role for calcium release-activated current (CRAC) in cholinergic modulation of electrical activity in pancreatic beta-cells
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Bhalla, Iyengar, 1999
- Emergent Properties of Networks of Biological Signaling Pathways
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Bifurcation analysis of the regulatory modules of
the mammalian G1/S transition
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Bindschadler, Sneyd, 2001
- A Bifurcation Analysis of Two Coupled Calcium Oscillators
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Bingzheng, Zhenye, Liansong, 1990
- A mathematical model of the regulation system of the secretion of glucocorticoids
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Bondarenko, Szigeti, Bett, Kim, Rasmusson, 2004
- Computer model of action potential of mouse ventricular myocytes
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Bonhoeffer, Rembiszewski, Ortiz, Nixon, 2000
- Risks and benefits of structured antiretroviral drug therapy interruptions in HIV-1 infection
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Borghans, Dupont, Goldbeter, 1997
- Complex intracellular calcium oscillations. A theoretical exploration of possible mechanisms
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Bornheimer, Maurya, Farquhar, Subramaniam, 2004
- Computational modeling reveals how interplay between components of a GTPase-cycle module regulates signal transduction
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Boyett, Zhang, Garny, Holden, 2001
- Control of the pacemaker activity of the sinoatrial node by intracellular Ca2+. Experiments and modelling
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Brightman, Fell, 2000
- Differential feedback regulation of the MAPK cascade underlies the quantitative differences in EGF and NGF signalling in PC12 cells.
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Brown, Choe, Shanahan, Czeisler, 1997
- A mathematical model of diurnal variations in human plasma melatonin levels
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Bueno, 2007
- Mathematical modeling and spectral simulation of genetic diseases in the human heart
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Bugbuster Systems Model
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Bugenhagen 2010
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Bugenhagen 2010
- Model of the overall baroreflex heart rate control system.
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Butera, Rinzel, Smith, 1999
- Models of Respiratory Rhythm Generation in the Pre-Botzinger Complex. II. Populations of Coupled Pacemaker Neurons
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Butera, Rinzel, Smith, 1999
- Models of Respiratory Rhythm Generation in the Pre-Botzinger Complex. II. Populations of Coupled Pacemaker Neurons
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Butera, Rinzel, Smith, 1999
- Models of Respiratory Rhythm Generation in the Pre-Botzinger Complex. I. Bursting Pacemaker Neurons
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Calzone, Thieffry, Tyson, Novak, 2007
- Dynamical modeling of syncytial mitotic cycles in Drosophila embryos
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Campbell, Chandra, 2006
- Functions of Stretch Activation in Heart Muscle
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Cartwright, Husain, 1986
- A model for the control of testosterone secretion
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Chang, Fujita, 1999
- A numerical model of the renal distal tubule
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Chang, Fujita, 1999
- A kinetic model of the thiazide-sensitive Na-Cl cotransporter
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Chang, Fujita, 2001
- A numerical model of acid-base transport in rat distal tubule
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Chassagnole, Rais, Quentin, Fell, Mazat, 2001
- An integrated study of Threonine-pathway enzyme kinetics in Escherichia coli
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Chay, 1997
- Effects of extracellular calcium on electrical bursting and intracellular and luminal calcium oscillations in insulin secreting pancreatic beta-cells
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Chay, Lee, Fan, 1995
- Appearance of Phase-locked Wenchbach-like Rhythms, Devil's Staircase and Universality in Intracellular Calcium Spikes in Non-excitable Cell Models
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Chen, Calzone, Csikasz-Nagy, Cross, Novak, Tyson, 2004
- Integrative Analysis of Cell Cycle Control in Budding Yeast
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Chen, Csikasz-Nagy, Gyorffy, Val, Novak, Tyson, 2000
- Kinetic Analysis of a Molecular Model of the Budding Yeast Cell Cycle
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Chen, Popel, 2006
- Theoretical analysis of biochemical pathways of nitric oxide release from vascular endothelial cells
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Chen, Popel, 2007
- Vascular and perivascular nitric oxide release and transport: biochemical pathways of neuronal nitric oxide synthase (NOS1) and endothelial nitric oxide synthase (NOS3)
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Cheng, Brown, Loeb, 2000
- Virtual muscle: a computational approach to understanding the effects of muscle properties on motor control
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Ciliberto, Novak, Tyson, 2003
- Mathematical Model of the Morphogenesis Checkpoint in Budding Yeast
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Ciliberto, Petrus, Tyson, Sible, 2003
- A kinetic model of the cyclin E/Cdk2 developmental timer in Xenopus
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Ciliberto, Tyson, 2000
- Mathematical Model for Early Development of the Sea Urchin Embryo
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Clancy, Rudy, 2001
- Cellular consequences of HERG mutations in the long QT syndrome: precursors to sudden cardiac death
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Clancy, Rudy, 2002
- Na Channel Mutation That Causes Both Brugada Syndrome and Long-QT Syndrome Phenotypes: A Simulation Study of Mechanism
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Cloutier, Bolger, Lowry, Wellstead, 2009
- An integrative dynamic model of brain energy metabolism using in vivo neurochemical measurements
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Cloutier, Wellstead, 2009
- The control systems structures of energy metabolism
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Colegrove, Albrecht, Friel, 2000
- Quantitive Analysis of Mitochondrial Ca2+ Uptake and Release Pathways in Sympathetic Neurons Reconstruction of the Recovery after Depolarisation-evoked [Ca2+] Elevations
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Collier et al (1996) Delta-Notch model
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Computational Mechanics of the Heart
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Conradie, Bruggeman, Ciliberto, Csikasz-Nagy, Novak, Westerhoff, Snoep,
- Restriction point control of the mammalian cell cycle via the cyclin E/Cdk2:p27 complex
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Cooling, Hunter, Crampin, 2008
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Cooling, Hunter, Crampin, 2009. Dual Calcium Protocol
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Cooling, Hunter, Crampin, 2009. Shen Calcium Protocol
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Cooling, Hunter, Crampin, 2009. Tomida Calcium Protocol
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Corrias, Buist, 2007
- Corrias, Buist, 2007
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Corrias, Buist, 2008
- Quantitative cellular description of gastric slow wave activity
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Cortassa et al. (2006) ECME model
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Cortassa, Aon, Marban, Winslow, O'Rourke, 2003
- An Integrated Model of Cardiac Mitrochondrial Energy Metabolism and Calcium Dynamics
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Cortassa, Aon, Winslow, O'Rourke, 2004
- A mitochondrial oscillator dependent on reactive oxygen species
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Costa, Holmes, McCulloch, 2001
- Modelling Cardiac Mechanical Properties In Three Dimensions

